CDS

Accession Number TCMCG007C13816
gbkey CDS
Protein Id XP_033141819.1
Location join(15292896..15292978,15293018..15294125,15294216..15294405,15294639..15294742,15294868..15294964,15295066..15295370,15295445..15295750,15295861..15296208)
Gene LOC103853206
GeneID 103853206
Organism Brassica rapa

Protein

Length 846aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_033285928.1
Definition pre-mRNA-splicing factor CWC22 homolog isoform X2 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category S
Description MIF4G domain-containing protein MA3 domain-containing protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K13100        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000375        [VIEW IN EMBL-EBI]
GO:0000377        [VIEW IN EMBL-EBI]
GO:0000398        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005681        [VIEW IN EMBL-EBI]
GO:0005684        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006397        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008380        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0071006        [VIEW IN EMBL-EBI]
GO:0071012        [VIEW IN EMBL-EBI]
GO:0071013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGGTAGGCACGATAGTTCCTCCGAGGAAGAGGAGAGAGTGAGAAGGAGTGATAGGAGAAGAGATAGAGGCTCTGATGACAGCTCGCGAAGAGATCTCGAGATTGGTCGCGTCGCAGATGGGGATGGGGAGAGAAGCCGTGGAGATAAGGTGAGAGCAGATAGCTCCTCAGATGAGGAATCAGGTGGGCGGTCTAGGAAGAATCGAAGAGAAGTCGACGCTGGTTCTGACGATGATGATAAAGAGAGAGATAGAGGGAAAAGACTGGAAGTAGATGATGCTTCTGTTCGTGAGAAGAGGGCAAGTAAAGAGAGGACTTCTTCTGATGAAGAAGATGAGAACCATCTTTCAAAGGTTGCTGGAGATGTTGATGATGATTATGAAAGGAAGAGAAGTCCCAAAGGCAGGGAGAGGCATGATAGAGAGAGGACTCATAGGGGTAGTAGAGTCTTAGCTGATAAGCCTTCTGGTAAAGAAGATGACAGACAAAAGGGTAGGAGAGGTGGGAGAGAAAGCGAGAGGAAAGGTAGAGATCATCAAGCATCTGATGACGATGAGGAAGGTGAGATTAGGAACAGGAGAAGAGGGAGAGAGAGGACTGATAGAGGTAACGAAGGTCTCTTAAAGAGAGATCGGAGGGAGAGAGACTACTCTGATAGGCATCGGAGGGACGATGGAGGTAGAGATGAAAAGGAGAGGCGACACCGTGACAGATATAACGATAGCCAAAGAGACAAGTTGAGAAAGGAAGAGAAGAGTGAAGCTGCAAAGCCCAAGCTGCCAGAGCTCAACCCATCTGACAGCAATGCTATGGCTTTGGGGAAAACTGGCGGAGTTTATATCCCTCCGTTCAAGCTAGCACGCATGATGAAGGAAGTGGAAGACAAGAGCAGTGTAGAGTATCAGCGTCTAACATGGGACGCTCTCCGTAAAAGTATTAACGGGCTGGTCAATAAAGTCAATGCAAGTAACATCAAGAACATAATCCCTGAACTGTTCGCTGAGAACCTCATCAGAGGAAGAGGGCTTTTCTGCCGTTCATGTATGAAGTCTCAAATGGCGTCTCCTGGATTCACTGATGTCTTTGCGGCTTTAGTCGCTGTTATCAACGCCAAGTTCCCTGAAGTTGCTGAACTTTTATTGAAAAGGGTCGTTTTGCAGCTTAAGAGAGCGTATAAGCGTAATGACAAGCCTCAATTGCTAGCTGCTGTTAAGTTTATAGCACATCTAGTGAACCAGCAAGTGGCTGAGGAAATCATTGCACTTGAATTAGTCACTGTACTTCTGGAAAACCCGACTGATGACAGTGTGGAGGTGGCTGTTGGTTTCGTTACAGAGTGTGGTGCGATGCTTCAGGACGTTACACCAAAAGGATTGCATGGGATTTTTGAGCGGTTTCGTGGTATACTGCACGAGGGAGAGATAGATAAGAGAGTTCAGTATTTGATTGAAGGACTCTTTGCTATTAGGAAAGCGAAGTTTCAGGGACATCCTGCTGTTCGTCCTGAGCTGGATCTTGTGGAAGAAAAATATTCGCATGATATATCTATTGATGACGAAATAAATCCTGAAACCTCTCTTGATGTTTTCAAACCTGATCCTGACTTCCTTGAGAACGAAAAGAAGTACGAGGTCCTGAAGAAGGAATTACTCGGTGAGGATGAGTCTGACGATGAAGATGGATCTGATGCTAGTTCAGAGGATAACGATGATGAGGAAGATGATTCTGATGAAGAAGAAGATGAAGAACAAATGAGAATAAGAGACGAGACAGAGACCAATCTTGTTAATCTTAGGAGGACAATATACCTGACCATTATGTCTAGCGTTGATTTTGAGGAAGCAGGTCACAAGTTGCTTAAAATTAAACTTGAACCAGGCCAAGAGATGGAGCTATGCATAATGCTTCTGGAATGTTGCTCACAAGAGAGAACGTACCTGCGTTACTACGGTTTGTTGGGTCAGCGTTTCTGTATGATCAACAAGATTCATCAAGAGAATTTTGAGAAATGTTTTGTTCAGCAGTACTCAATGATCCACCGGCTTGAGACGAACAAGCTGCGTAATGTGGCTAAGTTTTTCGCCCATTTACTGGGCACAGATGCACTCCCCTGGCATGTGCTTGCCTACATTCGCTTAACTGAGGAGGACACAACTTCGTCGTCCCGTATCTTCATTAAGATCCTTTTTCAGGAATTGTCAGAACACTTGGGGATTAGGCTGCTTAATGAGAGGCTTCAGGATCCAACAATGCAGGAGTCACTTGAATCCATCTTTCCTAAAGATAATCCAAAGAACACGAGGTTTGCAATCAACTTCTTCACCTCCATTGGTCTTGGAGGCATCACGGAGAATCTGAGAGAGTACCTGAAGAACATGCCACGGCTCATCATGCAACAACAGAAGCAAGTTGCAGAATCAACATCATCGTCTGGATCCGACAGTTCTGGTTCTGAGTCAGATTCATCGACTTCTTCTTCTTCTTCTTCTAGTTCGGATGAAAGCGACAGAGAGAAGAGGAAGCGAAGAAGAAGATCGTGA
Protein:  
MGRHDSSSEEEERVRRSDRRRDRGSDDSSRRDLEIGRVADGDGERSRGDKVRADSSSDEESGGRSRKNRREVDAGSDDDDKERDRGKRLEVDDASVREKRASKERTSSDEEDENHLSKVAGDVDDDYERKRSPKGRERHDRERTHRGSRVLADKPSGKEDDRQKGRRGGRESERKGRDHQASDDDEEGEIRNRRRGRERTDRGNEGLLKRDRRERDYSDRHRRDDGGRDEKERRHRDRYNDSQRDKLRKEEKSEAAKPKLPELNPSDSNAMALGKTGGVYIPPFKLARMMKEVEDKSSVEYQRLTWDALRKSINGLVNKVNASNIKNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVINAKFPEVAELLLKRVVLQLKRAYKRNDKPQLLAAVKFIAHLVNQQVAEEIIALELVTVLLENPTDDSVEVAVGFVTECGAMLQDVTPKGLHGIFERFRGILHEGEIDKRVQYLIEGLFAIRKAKFQGHPAVRPELDLVEEKYSHDISIDDEINPETSLDVFKPDPDFLENEKKYEVLKKELLGEDESDDEDGSDASSEDNDDEEDDSDEEEDEEQMRIRDETETNLVNLRRTIYLTIMSSVDFEEAGHKLLKIKLEPGQEMELCIMLLECCSQERTYLRYYGLLGQRFCMINKIHQENFEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLAYIRLTEEDTTSSSRIFIKILFQELSEHLGIRLLNERLQDPTMQESLESIFPKDNPKNTRFAINFFTSIGLGGITENLREYLKNMPRLIMQQQKQVAESTSSSGSDSSGSESDSSTSSSSSSSSDESDREKRKRRRRS